In developing a patient-reported outcome (PRO) for pediatric ulcerative colitis (UC) with guidance from FDA and EMA, 8 items were previously selected based on 79 concept elicitation interviews. An observer RO (ObsRO) was determined to be required for children younger than 8 years. Here, we aimed to finalize the included items and to validate the TUMMY-UC for its psychometric properties.
MethodsThe structure and exact wording of the PRO and the ObsRO versions were determined by cognitive debriefing interviews with children and their caregivers. Weights were assigned to each item based on ranking of importance. Then, in a prospective multicenter study, children with UC between 2-18 years who either underwent colonoscopy or provided stool for calprotectin completed the TUMMY-UC during 4 consecutive days, as well as 7 and 21 days thereafter for evaluating reliability and responsiveness. Construct and discriminative validity were assessed by different measures of disease severity and quality of life (QOL).
ResultsIn an iterative process of 129 cognitive interviews, the exact wording of the TUMMY-UC was determined. The PRO and ObsRO were formatted with identical structure to ensure conceptual equivalence for incorporating into one score. 71 children were included in the validation study (39 with colonoscopy and 32 with calprotectin; age 12.3±4.1 years, 26 (36%) in remission, 20 (29%) with moderate-severe disease). There was excellent reliability in the repeated day assessments (ICC 0.93 (0.88-0.96); p<0.001) and after 1 week in those judged as unchanged (0.90 (0.81-0.95); p<0.001). The TUMMY-UC total score had moderate to strong correlations with all constructs of disease severity: r=0.64 with UC Endoscopic Index of Severity (UCEIS, Figure 1), r=0.66 with IMPACT QOL questionnaire, r=0.43 with calprotectin, r=0.82 with the PUCAI, r=0.76 with patient/caregiver global assessment, r=0.5 with CRP, and r=-0.36 with albumin (all p<0.015). There was a slight superiority to combining TUMMY-UC scores of two consecutive days. The index had excellent discrimination of disease activity categories (figure 2) with a score<9 defining remission (Sen=93%, Spec=84%, AUROC=0.95 (95%CI 0.89-0.99). Showing high responsiveness, the DTUMMY-UC differentiated well between children who improved, worsened or remained unchanged after 3 weeks (Figure 3).The best cutoff of the TUMMY-UC to define response was a change of ≥10 points (AUROC 0.93 (95%CI 0.86-0.99)).
ConclusionThe TUMMY-UC, constructed from a PRO and ObsRO versions for children 8-18 and 2-7 years, respectively, is a reliable, valid and responsive index which can be now used in clinical practice and as an outcome measure in clinical trials.
Humans are colonized by complex microbial communities which contribute to physiological processes in the host. The communication between microbes and host is crucial to maintain the homeostasis and gut health. Disruption in the microbiome composition leads to increased inflammation and appearance of diseases, such as inflammatory bowel disease (IBD). Interspecies interaction prediction combined with gene expression patterns on individual cell level by single-cell omics data reveals a new insight into the molecular background of cell-type specific host-microbe interactions.
MethodsPreviously we developed the MicrobioLink pipeline (Andrighetti et al, Cells, 2020), an in silico microbe-host protein-protein interaction prediction algorithm. Here, we implemented a computational workflow based on MicrobioLink to predict and compare the cell-specific effects of a commensal bacteria in healthy and diseased conditions using a publicly available single-cell RNAseq dataset (Smilie et al, Cell, 2019) from colon biopsies describing 51 cell types - including fibroblasts, epithelial and immune cells - in healthy, non-inflamed and inflamed ulcerative colitis (UC). With functional analysis, microbe-affected processes have been discovered, while reliable network biology resources, such as OmniPath and Reactome, were used to identify the direct mechanism of action of the bacterial molecules.
ResultsDemonstrating the applicability of the new computational workflow, we analysed the effect of a common gut commensal bacteria - Bacteroides thetaiotaomicron (Bt) - on human immune cells focusing on the Toll-like receptor (TLR) signalling. We found that extracellular vesicles (EVs) secreted by Bt may be able to modulate the TLR pathway intracellularly. The analysis highlighted that Bt targets differ among cells and between the same cells in healthy versus UC conditions. The in silico findings were validated in EV-monocyte co-cultures demonstrating the requirement for TLR4 and Toll-interleukin-1 receptor domain-containing adaptor protein (TIRAP) in EV-elicited NF-kB activation.
ConclusionThe current pipeline offers potentially interesting connection points and detailed mechanistic insight containing mechanistic information about microbe-host interactions. This information can be tested and harnessed to understand better how microbial proteins may be of therapeutic value in inflammatory diseases, such as IBD.
Previous studies have described machine learning (ML) models to predict how human readers would score disease activity in UC using the endoscopic Mayo Score (eMS). So far, none employed deep human annotation that considers all the endoscopic features making up the eMS. Here we report the results of an ML model that is trained on eMS features using centrally read endoscopies.
Methods793 full-length videos were obtained from 249 patients with UC who participated in NCT02589665, a phase 2 trial with mirikizumab in patients with UC and associated with centrally read (single reader) eMS (CReMS) as the primary dataset. After cleaning for usable frames, the data were split into training, validation and testing subsets. The ML workflow consisted of annotation, segmentation, and classification (e.g., erosions, ulcers, erythema, vascular pattern, and bleeding). Human image classification and segmentation with bounding boxes and was subjected to quality control adjudicated by one of three IBD specialists, generating more than 60,000 eMS-relevant annotation labels. The model was evaluated on a test set of 147 videos using the CReMS, and a consensus set of 94 test videos, where CReMS and annotator reported eMS (AReMS) were in agreement without adjudication. The primary objective of the model was a categorical prediction of endoscopically inactive disease (eMS 0 & 1) compared with active disease (eMS 2 & 3). The secondary objectives of the model were to predict endoscopic healing (eMS 0) and to predict severe disease (eMS 3).
ResultsThe model performances are in Table 1. On the full test set of 147 videos, the model predicted inactive disease compared with active disease with an accuracy of 84%, positive predictive value (PPV) of 80%, and negative predictive value (NPV) of 85%. In the subset of 94 videos with CreMS and AReMS consensus, the model predicted inactive disease compared with active disease with an accuracy of 89%, PPV 87%, and NPV of 90%. In this same subset, the model predicted endoscopic healing and severe disease with an accuracy of 95% and 85%, PPVs of 86% and 82% and NPVs of 95% and 87%, respectively. For the secondary objectives in the full set of 147 videos, the model predicted endoscopic healing and severe disease with an accuracy of 90% and 80%, PPVs of 44% and 86%, and NPVs of 95% and 86%, respectively.
We have developed a ML predictive model of the eMS in UC using centrally read videos and demonstrate excellent distinction between active and inactive disease, and clear discrimination between other levels of endoscopic activity. We propose that this unique ML approach to endoscopic assessment be considered as a substitute to human central reading in future clinical trials.
1) Crohn’s disease and ulcerative colitis are distinct diseases but have many aspects in common, probably they just represent the extreme ends of the IBD spectrum
2) The ethiopathogenesis of IBD is far from completely unravelled, but there seems to be an important interplay between genetic, environmental and immunological factors
3) Diagnostic modalities consist of a good clinical history, clinical examination, biological tests, radiological and endoscopic imaging, and histological examination
Crohn Disease (CD) prevalence is rising worldwide. As altered genetics are improbable, this phenomenon likely relates to environmental-dietary changes linked with gut microbiome. We aimed to define host and microbial factors at CD diagnosis.
MethodsMultiomics analyses ofSOURCE cohort including clinical, biomarkers (CRP, fecal calprotectin), food frequency questionnaire (FFQ), serum metabolomics, mucosal terminal ileum (TI) transcriptomics, and fecal and mucosal biopsy samples for 16S microbial amplicon sequencing.
Results25 newly-diagnosed CD and 33 controls (median age 28 years, 50% males). Gender, age, and BMI did not differ between groups, but CRP (p=0.001) and calprotectin (p=E-10) were significantly higher in CD. FFQ results showed that compared to controls, pre-diagnosis CD patients consumed significantly more added sugar (g/day), starch (g/day) nitrite (mg/day), and significantly less vitamin K, D, vegetables, and olive oil (Fig 1). Microbial analyses highlighted significant differences (FDR<0.1) in amplicon sequence variants (ASVs) abundance between stool and biopsies samples (73 ASVs) and between CD and Controls samples (82 ASVs). Biopsy vs. stool samples were enriched for Veillonella, Fusobacterium, Neisseria, and Ruminococcus gnavus. CD showed higher abundance of Enterobacteriaceae and Ruminococcus gnavus with reduction of several Ruminococcaceae and Lachnospiraceae taxa (Fig. 1). Ileal transcriptomics differential expression (FC>1.5, FDR<0.05) replicated previous results with significant induction in CD of DUOX2, CXCL9, and DEFB4A and pathways linked to innate and adaptive immunity, and to extracellular matrix. CD down regulated genes included GUCA2B, SLC10A2, and GSTA1, and pathways linked with epithelial transporters. Serum metabolomics highlighted significant variations (FDR<0.25) in Linoleic acid, aKG, Tryptophan, nicotinamide, Docosahexaenoic acid, oxalate, and GABA between CD and controls. We next tested for significant association (FDR<0.25) between diet and multi-OMICs (Fig. 2). Associations between gut microbiome and TI transcriptomics, and serum metabolomics showed that Erysipelotrichacea taxa positivity correlated with serum oxalate, and TI expression of CEACAM6 and DUOX2. Associations between diet and TI transcriptomics and serum metabolomics indicated that B12, tryptophan and riboflavin consumptions were negatively associated with the bile acid transporter SLC10A2 in the TI, and vegetables consumption was positively associated with oxalate degrading Oxalobacter.
ConclusionConclusions: FFQ identifies difference in diet at the onset of CD that may contribute to pathogenesis. Integration between dietary and OMICs layers disclosed novel correlations warranting further exploration.
Objectives:
1. To understand the role of the IBD dietitian in the MDT
2. To review the current dietary approaches for IBD management
3. To discuss whether diet can be used as a prevention strategy
Understand whether upper GI pathology is found in UC, and byanswering the following questions:
- Do patients with ulcerative colitis have lesions in the upper GI tract?
- Are there lesions in the upper GI tract that are unique to ulcerative colitis?
- If upper GI UC exist, are there any predisposing factors?
- Is it possible to use upper GI biopsies in patients with colitis, to distinguish UC from Crohn’s disease (CD)?
Inflammatory bowel disease specimens have specific features which, in general, differ between Ulcerative Colitis and Crohn's disease.
The typical characteristics of UC are diffuse mucosal alteration and a regular bowel wall, whereas CD specimens usually show thickening of the bowel wall, visceral adhesions and mucosal skip lesion.
It is important to identify and recognise these features in order to section the surgical organs correctly. For this reason, there are recommendations for the cut up of IBD specimens.
Educational objectives:
- To learn how to approach an IBD specimen
- To understand the macroscopic differences between UC and CD specimens
- To learn how to dissect an IBD specimen and why
- To understand the importance of cut up in IBD pathology
1. To define the appropriate timing between medical and surgical management of IBD
2. To review medical and surgical treatment indications of the complications of IBD
3. To learn how to decide in multidisciplinary team between the two modalities of treatment
Discussion of presented topics as a chair of the complete session
Discussion of Tailored medical therapy in UC and the surgical approach.
Ulcerative proctitis (UP), defined as a colonic location limited to the rectum, is a poorly investigated condition in children, usually considered as a minor form of Ulcerative Colitis (UC). The aim of the present study was to compare the disease course of paediatric patients affected by UP at diagnosis with the other UC locations.
MethodsThis multicentre retrospective observational study has been carried out starting from the data prospectively registered in the IBD Registry of the Italian Society of Pediatric Gastroenterology, Hepatology and Nutrition (SIGENP). Seventeen IBD referral centres adhering to the registry were included in the study. Patients age 0 to 18 years, who were diagnosed with UC according to the Porto criteria starting from January 1, 2009, to May 1st, 2021 were identified. Only children with a minimum follow-up of 12 months were included in the study. Once enrolled, children were subsequently divided in two groups based on Paris classification: group 1 (E1) and group 2 (E2, E3 and E4).
ResultsEight-hundred-eighty-five children were finally included in the study (median age at diagnosis: 11.2 years, range: 0-18 years; M/F: 434/451), of whom 176 (19.8%) belonging to group 1 and 709 (80.1%) to group 2. The median age at diagnosis was significantly higher in group 1 when compared to group 2 [11.9 (0-18) versus 11 (0-18) years, respectively; (p<0.001)]. At diagnosis, the induction therapy was significantly different with 68 (39.5%) patients of group 1 undergoing steroid therapy versus 505 (71.2%) of group 2 (p<0.001) and 79 (41.9%) of group 1 practising only mesalamine respect to 186 (26.2%) of group 2 (p<0.001). A higher number of children from group 2 started immunosuppressive or biologic therapy as maintenance therapy at diagnosis [Group 1: 11 (6.2%) versus 173 (24.4%), respectively; (p<0.001)]. The median follow-up of our cohort was 4.5 years (range 1-13 years). At the last follow-up, 67/176 (38%) children with UP showed an extension of their disease location without significant difference when compared to group 2 [265 (37.5%); p=0.9], while 81 (45%) children from Group 1 were under immunosuppressive or biologic therapy versus 566 (79.8%) from group 2 (p<0.001). Five children (3%) of Group 1 underwent colectomy during the follow up versus 45 (6.9%) of Group 2 (p=0.06).
ConclusionUP is a frequent location of paediatric onset UC and the risk of endoscopic extension of proctitis is similar to the more extensive forms. A considerable number of patients with UP required immunosuppressive or biologic therapy during the follow-up and no significant difference was observed in terms of surgery. Overall, UP cannot be considered as a minor form of UC.
In recent decades, there has been a growing appreciation that Inflammatory Bowel Disease (IBD) needs a personalized approach to treatment so that the right therapy can be given to the right patient at the right time. Indeed, the potential benefits of personalized medicine for IBD are evident. One approach may be through prognostic information, which is essential for clinical decision-making, as it provides physicians with substantial evidence that can assist them in guiding patients during their disease and treatment course. Prognostic markers, such as clinical, serological, endoscopy, fecal, and histology factors, predict the natural course of the disease, and their utility is based on the assumption that treatment stratification can impact the course of the disease. Therefore, recent literature has focused on identifying good prognostic models based on genetic/serological or clinical/demographic factors that could substantially contribute to tailoring each patient's treatment and potentially surpass a significant barrier to personalized medicine in IBD due to the lack of algorithms to guide treatment from diagnosis.
This talk will present and summarize the most recent scientific evidence of disease risk factors as prognostic tools in Crohn's disease (CD) and ulcerative colitis (UC) and provide some take-home messages on this topic such as:
- Patients with CD and UC are so heterogeneous that a single treatment algorithm will never be suitable. Therefore, we need individualized treatment options and decisions.
- System dynamics analysis is a methodology that addresses the inherent dynamic complexity of interactions between variables. As an alternative to traditional statistical methods, it may have the ability to translate complex clinical data into patient-friendly results.
- Bayesian networks can be seen as an alternative to logistic regression, where statistical dependence and independence are not hidden in approximating weights but rather explicitly represented by links in a network of variables.
Compared to the general population, patients with (IBD) have a well-recognized increased risk of developing dysplasia and/or colorectal cancer (CRC), both in ulcerative colitis (UC) and Crohn’s disease (CD). Chronic inflammation is believed to promote the development of neoplasia. Adenocarcinoma complicating ulcerative colitis and Crohn’s disease develops from a precursor lesion, dysplasia or intra epithelial neoplasia, via an inflammation-dysplasia-carcinoma sequence. IBD-related dysplasia is categorized into either low-grade or high-grade dysplasia. Until recently, dysplasia was classified macroscopically into two general categories: flat dysplasia, which is endoscopically undetectable, and elevated or raised dysplasia. In 2015, the SCENIC [Surveillance for Colorectal Endoscopic Neoplasia detection and management in inflammatory bowel disease patients: International Consensus] nomenclature proposed the classification of lesions as visible or invisible to guide its clinical management. There is some evidence that flat/invisible dysplasia in IBD may have different molecular features when compared with polypoid/visible dysplasia. Adding to this complexity, several different histologic patterns of non-conventional dysplasia in IBD have been recently described that are morphologically distinct from conventional (or intestinal-type) dysplasia. At least seven subtypes have been reported, including, (i) hypermucinous; (ii) goblet cell-deficient; (iii) crypt cell dysplasia (or dysplasia with terminal epithelial differentiation); (iv) dysplasia with increased paneth cell differentiation; (v) sessile serrated lesion-like dysplasia; (iv) TSA-like; (v) ; (vi) (vii) serrated dysplasia, not other specified. There is increasing evidence that some of these non-conventional dysplasias are high-risk markers for advanced neoplasia. However, there is limited information regarding their clinicopathologic features and clinical outcomes, in part due to the rarity of these subtypes and the likelihood that they are under-recognized
Objective evaluation of treatment response is the gold standard in ulcerative colitis (UC). In this setting, intestinal ultrasound (IUS) is a non-invasive alternative to endoscopy. Recent studies showed change in IUS parameters after treatment initiation but studies with an endoscopic reference standard are scarce. The aim of this study was to evaluate early change of IUS parameters and determine cut-off values for endoscopic endpoints in UC patients starting anti-inflammatory treatment.
MethodsIn this longitudinal prospective study consecutive patients with moderate-severe UC (baseline endoscopic Mayo score (EMS)≥2) starting an anti-inflammatory treatment were included. Clinical scores, biochemical parameters and IUS parameters were collected at baseline, after 2 (T1), 6 (T2) and 8-26 weeks (T3) around time of the second sigmoidoscopy/colonoscopy. IUS parameters were measured as previously established1. Endoscopic remission (ER) and mucosal healing (MH) were evaluated in the sigmoid and defined as EMS=0 and EMS≤1, respectively. The ultrasonographist and endoscopist were blinded for the outcomes of endoscopy and IUS, respectively.
Results51 consecutive patients were included (Table 1) of whom 31 underwent a second endoscopy (MH: n=15 (45%), ER: n=9 (27%)). Two additional patients underwent colectomy and were considered non-responders. 18 patients did not undergo second endoscopy due to the COVID-19 pandemic (n=2), refusal (n=5), loss to follow-up (n=1) or treatment escalation because of clinical deterioration confirmed by IUS and biomarkers before second endoscopy was performed (n=10). Bowel wall thickness (BWT) was significantly lower from T2 onwards in patients reaching MH (p=0.026) and ER (p=0.002) at T3 (Fig 1). A significant decrease in BWT was already visible at T1 in patients receiving infliximab (p=0.001) or tofacitinib (p=0.007), but not in patients treated with vedolizumab (p=0.11) (Fig 2). Most accurate BWT cut-off values at T3 to determine MH and ER were 3.52 mm (AUROC: 0.95, 95% CI: 0.86-1.00, p<0.0001, sens: 91%, spec: 91%) and 2.98 mm (AUROC: 0.94, 95% CI: 0.85-1.00, p=0.001, sens: 87%, spec: 100%), respectively. Other IUS parameters at T3 did not improve association with MH or ER. IUS parameters at T2 that predict MH and ER are demonstrated in Table 2.
Table 1
Fig 1
Fig 2
Table 2
Conclusion
BWT and Colour Doppler Signal 6 weeks after start of treatment are associated with and could predict MH and ER. In addition, treatment response patterns at IUS are drug-specific. Furthermore, we have provided accurate BWT cut-off values for endoscopic outcomes. In a point-of-care setting, (early) treatment evaluation with IUS could guide treatment decision in UC in order to optimize treatment response.
1. Bots et al, JCC, 2021
Summary:
This presentation summarises the second ECCO Guideline on Malignancy in IBD. The guideline includes 24 statements, each underpinned by a systematic review of the literature. The topics covered include risk of cancer in IBD, malignancy risk associated with small molecule and biological therapies, and management of IBD in patients with a history of cancer.
Of course, this is too much to cover in a single presentation. As such, we will focus on the key developments since our previous guidance, as outlined below.
Educational objectives:
1) To recap prevention of colorectal cancer in IBD, with a focus on
- colorectal cancer screening and surveillance
- detection and management of dysplasia in IBD
2) To review IBD therapy and associated cancer risk
3) To understand how best to approach managing IBD in patients with active or recent malignancy
Educational objectives
- To introduce the updated ECCO guidelines on IBD and malignancy
- To highlight the latest evidence on colonoscopy surveillance in IBD
- To discuss the malignancy risk of specific therapies in IBD
- To discuss the management of patients with IBD and active malignancies
Education objectives
1. To present the updated ECCO consensus on Sexuality, Fertility, Pregnancy and Lacation
2. To discuss pregnancy and IBD
3. To review safety of drugs during pregnancy and lactation in IBD
New ECCO pregnancy guideline
1. Pre conception counseling, optimal disease control, planning, adherence
2. Drug safety at conception and during pregnancy
3. Management of disease exacerbation during pregnancy, assessment and therapeutic options
4. Management of biologics during pregnancy and post-partum
5. Multidisciplinary decision concerning through the entire pregnancy and important decision like mode of delivery
1. to present the new ECCO guidelines on therapeutic in ulcerative colitis
2. to present for acute severe ulcerative colitis, both medical and surgical management
3. to discuss Medical Versus Surgical Management of Refractory Moderate-to-severe UC
4. to give an overview on Preoperative Optimisation of Refractory Moderate-to-severe UC
5. to discuss Surgical Strategy and technical surgical aspects of Refractory Moderate-to-severe UC
Educational objectives
- To discuss the new ECCO guidelines on ulcerative colitis
- To consider the role of GRADE methodology in driving guideline quality
- To highlight relevant sections of the medical and surgical guidelines that may inform practice